| 2024 | "Reference genome for the endangered, genetically subdivided, northern tidewater goby, Eucyclogobius newberryi" in Journal of Heredity |
| 2022 | "Phylogeny, diversification, and biogeography of a hemiclonal hybrid system of native Australian freshwater fishes (Gobiiformes: Gobioidei: Eleotridae: Hypseleotris)" in BMC Ecology and Evolution |
| 2022 | "Patterns of phenotypic evolution associated with marine/freshwater transitions in fishes" in Integrative and Comparative Biology |
| 2022 | "Prolonged morphological expansion of spiny-rayed fishes following the end-Cretaceous" in Nature Ecology and Evolution |
| 2021 | "Delayed adaptive radiation among New Zealand stream fishes: joint estimation of divergence time and trait evolution in a newly delineated island species flock" in Systematic Biology |
| 2020 | "Supermatrix phylogeny resolves goby lineages and reveals unstable root of Gobiaria" in Molecular Phylogenetics and Evolution |
| 2019 | "Phylogeny & Divergence Times of Gobiarian Fishes" in Dissertations |
| 2015 | "Temporal genetic analysis of the endangered tidewater goby: extinction–colonization dynamics or drift in isolation?" in Molecular Ecology |
| 2012 | "Genetic stock identification of overwintering chum salmon in the North Pacific Ocean" in Environmental Biology of Fishes |
| 2012 | "Genetic stock composition analysis of chum salmon bycatch samples from the 2010 Bering Sea groundfish fisheries" in NOAA Technical Memorandum |
| 2011 | "Genetic stock composition analysis of chum salmon bycatch samples from the 2008 Bering Sea groundfish fisheries" in NOAA Technical Memorandum |
| 2011 | "Isolation and characterization of 12 microsatellites for the commercially important sablefish, Anoplopoma fimbria" in Conservation Genetics Resources |
| 2010 | "Rampant drift in artificially fragmented populations of the endangered tidewater goby (Eucyclogobius newberryi)" in Molecular Ecology |
| 2010 | "Genetic stock identification of chum salmon from the 2006 and 2007 Bering-Aleutian Salmon International Survey" in North Pacific Anadromous Fish Commission |
| 2009 | "Rampant drift in the endangered tidewater goby (Eucyclogobius newberryi): comparing genetic variation of naturally and artificially fragmented populations" in Theses and Projects |
