| 2024 | "Monitoring and Evaluation of Kelp Forest Ecosystems in the MLPA Marine Protected Area Network" in California Ocean Protection Council Data Repository |
| 2022 | "A Unique 100 Meter Underwater Survey Method Documents Changes in Abundance, Richness, and Community Structure of Hawaiʹi Reef Fishes" in Frontiers in Marine Science |
| 2020 | "Building bridges not walls: The past, present, and future of international collaboration and research in northwest Mexico" in Ciencias Marinas |
| 2017 | "Trophic designation and live coral cover predict changes in reef-fish community structure along a shallow to mesophotic gradient in Hawaii" in Coral Reefs |
| 2015 | "Abalone Without Holes: A Photo Iconography and Study of a Rare Morphological Variant of Haliotis (Gastropoda: Vetigastropoda)" in The Festivus |
| 2015 | "The effects of venting and decompression on Yellow Tang (Zebrasoma flavescens) in the marine ornamental aquarium fish trade" in PeerJ |
| 2014 | "Understanding the Scale of Marine Protection in Hawai‘i: from Community-Based Management to the Remote Northwestern Hawaiian Islands" in Advances in Marine Biology |
| 2014 | "Marine Protected Area Networks: Assessing Whether The Whole Is Greater Than The Sum Of Its Parts" in Plos ONE |
| 2014 | "Current Trends in the Analysis of Co-Management Arrangements in Coral Reef Ecosystems: a Social–ecological Systems Perspective" in Current Opinion in Environmental Sustainability |
| 2014 | "Caught In The Act: How The U.S. Lacey Act Can Hamper The Fight Against Cyanide Fishing In Tropical Coral Reefs" in Conservation Letters |
| 2013 | "Socioeconomic consequences of fishing displacement from marine protected areas in Hawaii" in Biological Conservation |
| 2013 | "Evaluating marine protected areas for managing marine resource conflict in Hawaii" in Marine Policy |
| 2012 | "Influences of oceanographic and meteorological features on reef fish recruitment in Hawai’i" in Marine Ecology Progress Series |
| 2012 | "Evaluating ontogenetic patterns of habitat use by reef fish in relation to the effectiveness of marine protected areas in West Hawaii" in Journal of Experimental Marine Biology and Ecology |
| 2011 | "Fisher behaviour influences catch productivity and selectivity in West Hawaii's aquarium fishery" in ICES Journal of Marine Science |
| 2011 | "NETWORKS – The assessment of marine reserve networks: guidelines for ecological evaluation" in Marine Protected Areas : A Multidisciplinary Approach |
| 2010 | "How U.S. ocean policy and market power can reform the coral reef wildlife trade" in Marine Policy |
| 2010 | "Larval Connectivity in an Effective Network of Marine Protected Areas" in PLoS One |
| 2010 | "Overall Status and Threats Assessment of Black Abalone (Haliotis Cracherodii Leach, 1814) Populations in California" in Journal of Shellfish Research |
| 2009 | "Hawaiian Islands Marine Ecosystem Case Study: Ecosystem- and Community-Based Management in Hawaii" in Coastal Management |
| 2009 | "Tropical Marine EBM Feasibility: A Synthesis of Case Studies and Comparative Analyses" in Coastal Management |
| 2009 | "Impacts of a Hawaiian marine protected area network on the abundance and fishery sustainability of the yellow tang, Zebrasoma flavescens" in Biological Conservation |
| 2008 | "Ontogenetic patterns of habitat use by reef-fish in a Marine Protected Area network: a multi-scaled remote sensing and in situ approach" in Marine Ecology Progress Series |
| 2007 | "Habitat-based submersible assessment of macro-invertebrate and groundfish assemblages at Heceta Bank, Oregon, from 1988 to 1990" in Journal of Experimental Marine Biology and Ecology |
| 2007 | "Comparison of trawled vs untrawled mud seafloor assemblages of fishes and macroinvertebrates at Coquille Bank, Oregon" in Journal of Experimental Marine Biology and Ecology |
| 2007 | "A quantitative approach for using multibeam sonar data to map benthic habitats" in Geological Association of Canada |
| 2006 | "Benthic invertebrates that form habitat on deep banks off southern California, with special reference to deep sea coral" in Fisheries Bulletin |
| 2006 | "Impact of observers’ experience level on counts of fishes in underwater visual surveys" in Marine Ecology Progress Series |
| 2004 | "Development of Benthic Sampling Methods for the Coral Reef Assessment and Monitoring Program (CRAMP) in Hawai'i" in Pacific Science |
| 2004 | "Quantitative benthic habitat characterization at Heceta Bank, Oregon" in The Journal of the Acoustical Scoiety of America |
| 2004 | "Evaluating Effectiveness of a Marine Protected Area Network in West Hawai'i to Increase Productivity of an Aquarium Fishery" in Pacific Science |
| 2004 | "Competing Perspectives in Resource Protection: The Case of Marine Protected Areas in West Hawai‘i" in Society & Natural Resources |
| 2003 | "Effects of Aquarium Collectors on Coral Reef Fishes in Kona, Hawaii" in Conservation Biology |
| 2002 | "Integration of submersible transect data and high-resolution multibeam sonar imagery for a habitat-based groundfish assessment of Heceta Bank, Oregon" in Fisheries Bulletin |
| 1996 | "Comparison of submersible-survey and hydroacoustic-survey estimates of fish density on a rocky bank" in Fisheries Bulletin |
| 1993 | "World Gas Supplies for the Future: Questions and Answers" in Energy Exploration & Exploitation |
| 1993 | "Measurement of Significant Marine Paleotemperature Variation Using Black Abalone Shells from Prehistoric Middens" in Quaternary Research |
| 1992 | "Fish-habitat associations on a deep reef at the edge of the Oregon continental shelf" in Fisheries Bulletin |
| 1988 | "Morphological variation along intertidal gradients in a population of black abalone Haliotis cracherodii Leach 1814" in Journal of Experimental Marine Biology and Ecology |
| 1988 | "Geographic Variation and Heterochrony in Two Species of Cowries (Genus Cypraea)" in Evolution |
| 1980 | "Organic Geochemistry of Margin Sediments and Its Significance for Hydrocarbon Generation" in Philosophical Transactions of the Royal Society A: Mathematical, Physical and Engineering Sciences |
| 1979 | "Effects on prolific petroleum source rocks and major coal deposits caused by sea-level changes" in Nature |
| 1978 | "Geochemical study of the Uinta Basin: formation of petroleum from the Green River formation" in Geochimica et Cosmochimica Acta |
