| 2005 | "Clouds among the Ecological Visions" in BioScience |
| 2005 | "The use of invertebrate functional groups to characterize ecosystem attributes in selected streams and rivers in south Brazil" in Studies on Neotropical Fauna and Environment |
| 2005 | "An Examination of References for Ecosystems in a Watershed Context: Results of a Scientific Pulse in Redwood National and State Parks, California" in AGU Spring Meeting |
| 2005 | "Basin Scale Evaluation of Stream Invertebrate Community Functional Organization" in AGU Spring Meeting |
| 2004 | "Ten Suggestions to Strengthen the Science of Ecology" in BioScience |
| 2004 | "Periphyton response to increased light and salmon carcass introduction in northern California streams" in Journal of the North American Benthological Society |
| 2003 | "Spring growth of caddisflies (Limnephilidae : Trichoptera) in response to marine-derived nutrients and food type in a Southeast Alaskan stream" in International Journal of Limnology |
| 2002 | "Channel-floodplain coupling in the Kissimmee River, Florida (USA): invertebrate movement and fish feeding" in Vereinigung fur theoretische und angewandte Limnologie |
| 2002 | "Ecosystem metabolism in the Kissimmee River, South Florida, USA" in SIL Proceedings, 1922-2010 |
| 2002 | "Development and application of a macroinvertebrate functional-group approach in the bioassessment of remnant river oxbows in southwest Florida" in Journal of the North American Benthological Society |
| 2002 | "Riparian-stream linkage paradigm" in SIL Proceedings, 1922-2010 |
| 2002 | "The contribution of suspended organic sediments to turbidity and sediment flux" in Proceedings, 8th Federal Interagency Sedimentation Conference |
| 2001 | "Distribution, diel movement, and growth of the grass shrimp Palaemonetes paludosus in the Kissimmee River-floodplain ecosystem, Florida" in International Journal of Limnology |
| 2000 | "Application of invertebrate functional groups to wetland ecosystem function and biomonitoring" in Biomonitoring and Management of North American Wetlands |
| 2000 | "Profitable stream positions differ for brook trout and cutthroat trout" in Wild Trout VII. Management in the New Millenium: are we ready? |
| 1999 | "Effects of Long-Term Disturbance on Riparian Vegetation and In-Stream Characteristics" in Journal of Freshwater Ecology |
| 1999 | "Evaluation of the restoration of the Kissimmee River in South Florida" in The natural history of the lower Tennessee and Cumberland River valleys |
| 1999 | "Establishing baseline seagrass parameters in a small estuarine bay" in Seagrasses: Monitoring Ecology, Physiology, and Management |
| 1998 | "A case for inside out (pathogenic) population control in a stream insect" in SIL Proceedings, 1922-2010 |
| 1996 | An introduction to the aquatic insects of North America |
