| Vargas-Hernandez, Oscar M. | 2021 | "Admixture may be extensive among hyperdominant Amazon rainforest tree species" in New Phytologist |
| Vargas-Hernandez, Oscar M. | 2021 | "Lista Roja de Plantas Vasculares Endémicas de la Alta Montaña de Colombia" in Instituto de Investigación de Recursos Biológicos Alexander von Humboldt |
| Vargas-Hernandez, Oscar M. | 2020 | “Patterns of Speciation are Similar Across Mountainous and Lowland Regions for a Neotropical Plant Radiation (Costaceae: Costus)" in Evolution |
| Vargas-Hernandez, Oscar M. | 2020 | "Diversification history of Neotropical Lecythidaceae, an ecologically dominant tree family of Amazon rain forest" in Neotropical Diversification: Patterns and Processes |
| Vargas-Hernandez, Oscar M. | 2020 | "Beyond Refugia: New insights on Quaternary climate variation and the evolution of biotic diversity in tropical South America" in Neotropical Diversification: Patterns and Processes |
| Vargas-Hernandez, Oscar M. | 2020 | "A consensus phylogenomic approach highlights paleopolyploid and rapid radiation in the history of Ericales" in American Journal of Botany |
| Vargas-Hernandez, Oscar M. | 2019 | "Target sequence capture in the Brazil nut family (Lecythidaceae): marker selection and in silico capture from genome skimming data" in Molecular Phylogenetics and Evolution |
| Vargas-Hernandez, Oscar M. | 2019 | "Characterizing gene tree conflict in plastome-inferred phylogenies" in Peer Journal |
| Vargas-Hernandez, Oscar M. | 2019 | "Nomenclatural priority of the genus Linochilus over Piofontia (Asteraceae: Astereae)" in Phytotaxa |
| Vargas-Hernandez, Oscar M. | 2018 | "Reinstatement of the genus Piofontia: a phylogenomic-based study reveals the biphyletic nature of Diplostephium (Asteraceae: Astereae)" in Systematic Botany |
| Vargas-Hernandez, Oscar M. | 2018 | "Complete plastome sequences from Bertholletia excelsa and 23 related species yield informative markers for Lecythidaceae" in Applications in Plant Sciences |
| Vargas-Hernandez, Oscar M. | 2017 | "Conflicting phylogenomic signals reveal a pattern of reticulate evolution in a recent high-Andean diversification (Asteraceae: Astereae: Diplostephium)" in New Phytologist |
| Vargas-Hernandez, Oscar M. | 2017 | "Bayesian and likelihood phylogenetic reconstructions of morphological traits are not discordant when taking uncertainty into consideration" in Proceedings of the Royal Society B |
| Vargas-Hernandez, Oscar M. | 2016 | "Asteraceae" in Catálago de líquenes y plantas de Colombia |
| Vargas-Hernandez, Oscar M. | 2012 | "Preliminary Phylogeny of Diplostephium (Asteraceae): Speciation Rate and Character Evolution" in Lundellia |
| Vargas-Hernandez, Oscar M. | 2011 | "A nomenclator of Diplostephium (Asteraceae: Astereae): a list of species with their synonyms and distributions by country" in Lundellia |
| Vargas-Hernandez, Oscar M. | 2006 | "Clave para la indentificación de las especies de Diplostephium (Asteraceae, Astereae) en Colombia" in Revista de la Academia Colombiana de Ciencias Exactas Físicas y Naturales |
| Vargas-Hernandez, Oscar M. | 2005 | Guía Botanica de los Bosques de Yerbabuena |
| Varian, Christina | 2025 | "Utilizing PCR to Test Oysters from the Humboldt Bay for Toxoplasma gondii" in ideaFest Posters |
| Varkey, Jacob P. | 2006 | "Influence of leaf differentiation on the developmental pathway of coleus chloroplasts" in New Phytologist |
